Image_repo

This is the Digital Anatomist Image Manager. Decided to keep it running as a resource since there are alot of images (> 8000), many of which are annotated and could be made into interactive atlas. Of particular interest are Ben Weinstein's images from Cornelius Rosse's textbook.

Followed instructions in install docs (see Wirm core topic)

cd /opt/wirm/wirm/repos

cvs checkout -d image_repo src/repos/image_repo

As per instructions http://resources.si.washington.edu/wrm/doc/repos.html created mysql user wirm, database image_repo owned by wirm

Ran install script for creating image_repo, checked that it ran OK.

Next I loaded the content of the sphenoid image_repo by:

Tarring and then scping crux:/usr/local/backups/systems/sphenoid/databases/wirm/var/repos/image_repo to synapse temporary directory

Untarred, loaded included mysql dump file into image_repo database above

Moved included fsa and viz directories to synapse:/opt/wirm/var/repos/image_repo, replacing same directories created by install script.

Logged into mysql and found many users with bogus logins, deleted all users that didn't have any images assciated with them. Also disabled new user registration.

The relevant schema for image_repo is http://resources.si.washington.edu/viewvc/cvsroot/repos/image_repo/lib/d....

The relevant file storage area is image_repo/fsa/default. Fields in the schema provide paths to the fsa, which is where the images and annotations are saved.

Downloaded fsa to my local machine, did fairly random sample check of images. They all seem legitimate.

TODO: Change links once CNAME wirm is available.