Summary of FMA Resources

Latest release: Version 5.1.0

ChangeLog:

This version of the FMA is now coherent under EL reasoning in Protege, that is there are no classes that are equivalent to owl:Nothing. The fixes were done by Todd Detwiler, and are described by him in more detail in the file Fixing_reasoning_in_the_FMA.pdf, included in the download package.

Source:

• http://purl.org/sig/ont/fma.owl redirects to:
• http://sig.biostr.washington.edu/share/downloads/fma/release/latest/fma.owl

Alternate source:

• https://bioportal.bioontology.org/ontologies/FMA (version 5.0.0 owl download)

Accessory files

• http://sig.biostr.washington.edu/share/downloads/fma/release/latest/puns/pun_fma.owl
  • puns that can be imported into fma.owl to make Sparql queries simpler
• http://sig.biostr.washington.edu/shahttp://sig.biostr.washington.edu/share/downloads/fma/release/latest/license.txt
  • open source license
• http://sig.biostr.washington.edu/sharehttp://sig.biostr.washington.edu/share/downloads/fma/release/latest/README.txtdownloads/fma/release/latest/READ...
  • explaining the various files

Package

• http://sig.biostr.washington.edu/share/downloads/fma/release/latest/fma.zip
  • for convenience, contains fma.owl as well as the accessory files

Browser:

• http://fma.si.washington.edu/browser

License:

• https://creativecommons.org/licenses/by/3.0

The following are currently neither monitored nor maintained, but are retained in case the FMA ever becomes active again.
Mailing lists:

• fma-content
  • post to this list at: fma-content@u.washington.edu(link sends e-mail)
  • sign up for this list at: https://mailman1.u.washington.edu/mailman/listinfo/fma-content
• fma-announce
  • post to this list at: fma-announce@u.washington.edu(link sends e-mail)
  • sign up for this list at: https://mailman1.u.washington.edu/mailman/listinfo/fma-announce

Issue tracker:

• https://bitbucket.org/uwsig/fma/issues